DynamicModel Class Reference

#include <Dynamics.hpp>

Inheritance diagram for DynamicModel:

Public Member Functions
	DynamicModel (DynamicMesh &mesh_, Record &record_)
	Constructs a new Model object.
void	next_step ()
	This code iterates over all vertices in a mesh and displaces them randomly based on a force term and a random term. The displacement is added to the original vertex position.
Public Member Functions inherited from Model
	Model (Mesh &mesh_, Record &record_)
	Constructs a new Model object.
bool	should_continue_optimization ()
	Determines whether the optimization algorithm should continue running.
void	determine_trial_step_size ()
	This code determines the step size used in an optimization algorithm. The step size is used to calculate how far to move in each iteration of the optimization algorithm to minimize an energy function.
std::string	to_string_current_step ()
	Returns a string representation of the current step's iteration number, trial step size, and optimal step size. The function concatenates the values of model.iteration, model.oa.trialStepSize, and model.stepSize to the following format: "step: , trial StepSize = , StepSize = ".
void	update_ncg_direction ()
	Updates the direction for nonlinear conjugate gradient (NCG) optimization.
void	reset_ncg_direction ()
	Reset the direction for nonlinear conjugate gradient (NCG) optimization.
double	linear_search_for_stepsize_to_minimize_energy ()
	Performs a linear search to find the optimal step size that minimizes energy using either nonlinear conjugate gradient method or simple line search.
bool	simulated_annealing_next_step (bool forceAttempt=false)
	Use a Metropolis thermal trial move to sample beyond local gradient descent.
void	enforce_boundary_conditions_after_coordinate_update ()
	Synchronize boundary/ghost coordinates after direct coordinate updates.
void	update_vertex_using_NCG ()
	Update vertex coordinates using a non-linear conjugate gradient method.

Public Attributes
DynamicMesh &	mesh
double	randScaleConst
double	forceScaleConst
unsigned int	randomSeed
std::mt19937	gen
std::normal_distribution	normal_dist
Public Attributes inherited from Model
Mesh &	mesh
Record &	record
int	iteration
double	stepSize
OptimizationAlgorithm	oa
std::vector< Force >	ncgDirection0
	vector to store the initial direction for nonlinear conjugate gradient optimization
bool	isHeating = true
int	currentCoolingStep = 0
int	coolingStep = 35
int	currentHeatingStep = 0
int	heatingStep = 15
double	highTemperature = 0.0
std::mt19937	thermalRng
	Reproducible random generator for thermal fluctuation trial moves.
int	thermalFluctuationAttemptCount = 0
	Number of attempted thermal trial moves.
std::vector< ThermalFluctuationRecord >	thermalFluctuationRecords
	Diagnostics for thermal trial moves.

Constructor & Destructor Documentation

DynamicModel()

DynamicModel::DynamicModel	(	DynamicMesh &	mesh_,
		Record &	record_
	)

Constructs a new Model object.

Parameters

mesh_	The mesh object to be encapsulated.
record_	The record object to be encapsulated.

Member Function Documentation

next_step()

void DynamicModel::next_step

(

)

This code iterates over all vertices in a mesh and displaces them randomly based on a force term and a random term. The displacement is added to the original vertex position.

The boundary conditions are checked for each vertex before displacement, and if the vertex is a ghost or boundary, and not part of a periodic boundary condition, then the displacement is set to 0.

The displacement amount, along with the vertex index, whether it is a boundary or ghost vertex, and the dimension being displaced (x, y, z) is printed to the console using std::cout.

Member Data Documentation

forceScaleConst

double DynamicModel::forceScaleConst

gen

std::mt19937 DynamicModel::gen

mesh

DynamicMesh& DynamicModel::mesh

Hides Model::mesh; The mesh object.

normal_dist

std::normal_distribution DynamicModel::normal_dist

randomSeed

unsigned int DynamicModel::randomSeed

randScaleConst

double DynamicModel::randScaleConst

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The documentation for this class was generated from the following file:

• include/Dynamics.hpp