Parameters.hpp File Reference

This file defines essential parameters used in continuum membrane as well as membrane dynamics code. The Param structure defines all the essential physical constants and simulation parameters for the model; multiple instances of Param help with parallel computing of the model. The Mesh class includes vertices and faces information for the control mesh of the model. More...

#include <math.h>
#include <cmath>
#include <vector>
#include <string>
#include <iostream>
#include <gsl/gsl_matrix.h>
#include <gsl/gsl_blas.h>
#include <gsl/gsl_linalg.h>
#include "energy_force/Energy.hpp"
#include "energy_force/Force.hpp"
#include "linalg/Linear_algebra.hpp"

Go to the source code of this file.

Classes
struct	DeformationCount
	Bookkeeps the shape and area deformation count of Mesh. More...
struct	SubdivisionMatrix
	5 Subdivison matrices for irregular mesh. More...
class	Particle
	Represents a single diffusing particle in a simulation. More...
struct	Param
	Contains simulation parameters and physical constants. More...

Enumerations
enum class	BoundaryType { Fixed , Periodic , Free }
	The type of boundary condition for the simulation. More...

Functions
std::ostream &	operator<< (std::ostream &os, const Param &param)
	Overloaded stream insertion operator to output the Param struct in a readable format.

Detailed Description

This file defines essential parameters used in continuum membrane as well as membrane dynamics code. The Param structure defines all the essential physical constants and simulation parameters for the model; multiple instances of Param help with parallel computing of the model. The Mesh class includes vertices and faces information for the control mesh of the model.

Author

Y Ying (yying.nosp@m.7@jh.nosp@m..edu)

Y Fu (yfu31.nosp@m.@jh..nosp@m.edu)

Date

2023-01-05

Copyright

Copyright (c) 2023

Enumeration Type Documentation

BoundaryType

enum class BoundaryType

strong

The type of boundary condition for the simulation.

Enumerator
Fixed	Fixed boundary condition.
Periodic	Periodic boundary condition.
Free	Free boundary condition.

Function Documentation

operator<<()

std::ostream & operator<<	(	std::ostream &	os,
		const Param &	param
	)

Overloaded stream insertion operator to output the Param struct in a readable format.

Parameters

os	The output stream
param	The Param struct to be outputted

Returns

ostream& A reference to the output stream